Table of contents : Front Matter....Pages i-vi Recent Advances in Ecological Genomics: From Phenotypic Plasticity to Convergent and Adaptive Evolution and Speciation....Pages 1-5 Trait Transitions in Explicit Ecological and Genomic Contexts: Plant Mating Systems as Case Studies....Pages 7-36 Revisiting Mortimer’s Genome Renewal Hypothesis: Heterozygosity, Homothallism, and the Potential for Adaptation in Yeast....Pages 37-48 Ecological Genomics of Adaptation and Speciation in Fungi....Pages 49-72 Integrating Phenotypic Plasticity Within an Ecological Genomics Framework: Recent Insights from the Genomics, Evolution, Ecology, and Fitness of Plasticity....Pages 73-105 Eco-Evo-Devo: The Time Has Come....Pages 107-125 Evolutionary and Ecological Genomics of Developmental Plasticity: Novel Approaches and First Insights From the Study of Horned Beetles....Pages 127-148 Neurogenomics of Behavioral Plasticity....Pages 149-168 Ecological Genomics of Host Behavior Manipulation by Parasites....Pages 169-190 Ecological Epigenetics....Pages 191-210 The Reproducibility of Adaptation in the Light of Experimental Evolution with Whole Genome Sequencing....Pages 211-231 Ecological Genomics of Host Shifts in Drosophila mojavensis ....Pages 233-247 The Genomics of an Adaptive Radiation: Insights Across the Heliconius Speciation Continuum....Pages 249-271 Merging Ecology and Genomics to Dissect Diversity in Wild Tomatoes and Their Relatives....Pages 273-298 Integrated Genomics Approaches in Evolutionary and Ecological Endocrinology....Pages 299-319 Evolutionary Genomics of Environmental Pollution....Pages 321-337 Signatures of Natural Selection and Ecological Differentiation in Microbial Genomes....Pages 339-359